rs30746330 SNP Detail

Summary

• ID
  rs30746330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37725956 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATAGTTA GCATTTCAGA
  AGAAATGGGG AGATGTTCAG AGACCTACAT AAATAGGCAC ATGAAGAAGT CCCAGCAAAA
  TATATGTTCT TTAGTTCTTC AGTAAGAGAA TTTTGCTTTC TCTATATTAA AATTGACTTA
  GCTTTTCCCC CTCCCAAGCA GGGCCTTTTC TTAGCCCAGG TTGGTTGGAG CTCATTCTGT
  R
  GCTCAAATTG GTTCCAAGCT CATGATCTTT TTGCCTCCAG TCTTCCAAGT GCTGGGATTA
  TGTGTGCCAC CATGCCCAAC CAACTAGACA AATTTTTTAT AGTCAATGCT CAAGAACTTT
  AACAATTTTG AATATAGAAT ATTGCTCTCA TAAATTCTTA ATGTTTTCAA ATCAACCTAT
  AAGCATATAT GCTGCTGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45461203	mCV25406317	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss134810622	ENSMUSSNP557006	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs30746330					SNP	G	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37725956 () rs orientation: forward

Symbol	Name	Function Class
Rr374835	regulatory region 374835	913 bp upstream
Rr406863	regulatory region 406863	93 bp proximal
Rr575537	regulatory region 575537	422 bp proximal
Rr575538	regulatory region 575538	1809 bp proximal
Tssr33054	transcription start site region 33054	612 bp downstream