rs30747098 SNP Detail

Summary

• ID
  rs30747098
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:41019714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACG TGTGTGTGTG TGTGTGTGTG
  Y
  GCGCGCGTGC TGTAGGAGGA AGATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss44958645	mCV22807590	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss325808833	CHEV_19_41105765	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30747098					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:41019714 () rs orientation: forward

Symbol	Name	Function Class
Dntt	deoxynucleotidyltransferase, terminal	within coordinates
Rr365008	regulatory region 365008	1114 bp distal
Rr365009	regulatory region 365009	514 bp distal
Rr370496	regulatory region 370496	1851 bp downstream
Rr370497	regulatory region 370497	within coordinates
Tssr5510	transcription start site region 5510	59 bp upstream
Tssr156412	transcription start site region 156412	1877 bp downstream
Tssr159242	transcription start site region 159242	139 bp upstream
Tssr159243	transcription start site region 159243	112 bp upstream
Tssr159244	transcription start site region 159244	95 bp upstream
Tssr159245	transcription start site region 159245	82 bp upstream
Tssr159246	transcription start site region 159246	769 bp downstream
Tssr159247	transcription start site region 159247	783 bp downstream