rs30747458 SNP Detail

Summary

• ID
  rs30747458
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127796622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGATAAA TAAAAGAGGG
  AGCTGGCTGT GTGGTGACTC CTGAGGGAAA GCCAGGATGA GAGCAAGGGG AGAGCCCTCG
  CCCATCTTGA GTGTAGTTCC GTGGCTTCCG GGGGATTGGT GAGGGTGCTC TTGCCCTGCT
  TACGACGGCT TTCAGAAGTT TTCTGTAAAA TTTGAACAAA AAGACTGAAG ATGAGACACA
  M
  AAAAAAGGGA AAGTCTAGTG AGTAAAAGGA TTTACTTCAA TAACTCCCCA AATCCTACCC
  CCAAGTGCGA GGATCATCTC AGTGCTGCAC AGCCGCGAGC GAGCAAGCGA GCGAGCGAGC
  CGGGCCCTGA CACTGTGGTG CGAGACCATG ATTCATACGA AAGGCAGCAT AATTACTGTG
  AAGAGCAGAT TGGATTTCCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45461114	mCV25235057	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
ss135877559	ENSMUSSNP866714	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
ss320959103	CHEV_3_127705891	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30747458					SNP	A	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127796622 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	604 bp distal
Rr584917	regulatory region 584917	891 bp distal