rs30747862 SNP Detail

Summary

• ID
  rs30747862
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70350253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAAAGAG GACCACAGTA
  AAGTCAGGAG GGTGAAATGC GTGTCCACAG CCAAGTGCCA AGACATGCCC CTCCCTGCCT
  GCCAGCACAC ATGGGCGCAC ACACCCTGCT CCATCCACCA GCTTCCCAGA ATGCTGAGCA
  GGGTCGCCTT TATTCCCAGT GAGGAGACGT GTGGGCTCTT CCCTTCCCAG GAGAAAAAAA
  M
  CTACATATCA AGAAGATCCC CACAAAAATG TTAGTCAGAT GGCTCTTCAT GTTTAACCAA
  CATGCTATGC ACTTCAGAAT TCTCTTTTGT CCCCAAGTCA CACATGTGAG GCTTCCGAGG
  AAGACGCGTC AGACCAATCA TAAAGACTAG AAAGAAAGAG ACTGGAAAGG GAGAAGAAAC
  TTTAAGCTGC TACAGTCCAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39216605	mCV24338940	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30747862					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70350253 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494844	regulatory region 494844			1700 bp distal
Rr494845	regulatory region 494845			1718 bp distal