rs30749496 SNP Detail

Summary

• ID
  rs30749496
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:20707500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGACAGCC AAGGCTACAC AGAGAAACCC TGTCTCAAAA
  TAATAATAAT AATAATAATA ATAATAATAA TAATAATAAT AATAATTACT ACTACTACTA
  M
  TACTAATAAT AATAATAATA GGGGCTGGAG AGATGGCTTA GTGGTTAAGA GCACTGAATG
  CTCTTCCAGA GGTCTTGAGT TCAATTCCCA GCAACCACA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39217585	mCV23218613	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss139195084	ENSMUSSNP4693550	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30749496					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:20707500 () rs orientation: forward

Symbol	Name	Function Class
Myoz1	myozenin 1	892 bp upstream
Rr488338	regulatory region 488338	774 bp distal
Rr488339	regulatory region 488339	954 bp proximal
Rr488340	regulatory region 488340	1060 bp proximal
Synpo2l	synaptopodin 2-like	1514 bp downstream
Tssr127644	transcription start site region 127644	924 bp upstream