rs30749845 SNP Detail

Summary

• ID
  rs30749845
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:30330731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT AAAGTTTGAG GCAGGGTCTT
  R
  TTGTTAAGTT ACCCAGCAGG TCATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39218353	mCV23919232	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss324576616	CHEV_14_31421960	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30749845					SNP	G	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:30330731 () rs orientation: forward

Symbol	Name	Function Class
Gm62449	predicted gene, 62449	within coordinates
Prkcd	protein kinase C, delta	within coordinates
Rr292184	regulatory region 292184	930 bp distal
Rr292185	regulatory region 292185	within coordinates
Rr404042	regulatory region 404042	724 bp downstream
Tssr4363	transcription start site region 4363	1000 bp upstream
Tssr124839	transcription start site region 124839	851 bp downstream
Tssr127873	transcription start site region 127873	970 bp upstream
Tssr127874	transcription start site region 127874	953 bp upstream
Tssr127875	transcription start site region 127875	950 bp upstream
Tssr127876	transcription start site region 127876	371 bp downstream