rs30750948 SNP Detail

Summary

• ID
  rs30750948
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36501463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGA GTTGAGAAGA AATCGAAGAA
  K
  GCAGGTAGTG GAGAAACACT AACCG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss44958873	mCV27594887	ABI	CRAMUS_MOUSE	f	SNP		G	T					G		G
ss47219258	NES11100973	PERLEGEN	MM_PANEL2	f	SNP	G		T	T	G	G	T		G	G	T	T		G	G	T	G		G
ss148927343	ENSMUSSNP5373292	ENSEMBL	ENSEMBL_Sanger	f	SNP			T							G
ss319688914	CHEV_1_36519227	CHEVERUD	SCREENING_POP	f	SNP													T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30750948					SNP	G	G	T	T	G	G	T	G	G	G	T	T	T	G	G	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219258	NES11100973	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36501463 () rs orientation: forward

Symbol	Name	Function Class
Gm33401	predicted gene, 33401	within coordinates
Rr409306	regulatory region 409306	1484 bp proximal
Tssr6266	transcription start site region 6266	375 bp downstream