rs30753043 SNP Detail

Summary

• ID
  rs30753043
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142369249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA TACAGGGGTT GAAGAGAAAG
  K
  ATGAGGAACC TGGGAAGGGC GCAGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ
ss45463894	mCV23530629	ABI	CRAMUS_MOUSE	f	SNP		T				T	G
ss47013347	NES10855240	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T		G	T
ss136016592	ENSMUSSNP2618170	ENSEMBL	ENSEMBL_Sanger	f	SNP		T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ
rs30753043					SNP	T	T	T	T	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47013347	NES10855240	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142369249 () rs orientation: forward

Symbol	Name	Function Class
Gbp2-ps	guanylate binding protein 2, pseudogene	within coordinates
Gm19166	predicted gene, 19166	956 bp downstream