rs30755750 SNP Detail

Summary

• ID
  rs30755750
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36052260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAACTGCC TGGCACACAC
  AATTAGCATT GTCATGGAAG ATAATAGACC ATATTTTGAC ATTTTCTGTT CTATTTTATT
  AAATCAAACA ACAGTTTGAA AATATAATTG AATGCACCCC TTGGGTAAGG CAGTATTGAC
  ATTAAGCCAG AGAAATCAAA GGAAGGACGT TGAACAGAGA TAATAGAAAT AAGAAATGTT
  S
  GCAGGGCTAG AGAGATGGCT CAGCGGTTAA GAGCACTGAC TGCTCTTCCA GAGGTCCTGA
  GTTCAATTCA AACCACATGG TGGCTCACAA CCATCTGTAA TGGGATCTGA TGGACGCTTT
  TAGTGTGTGT CCGAAGACAG CTGTAGTGTA CTAATATAAA CAAAAATAGA TAAATCTTTA
  AGCCAGGCAG TGGGGGCGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss45463324	mCV24305373	ABI	CRAMUS_MOUSE	f	SNP		C	G			G	G
ss51452930	NES14433144	PERLEGEN	MM_PANEL2	f	SNP	C			C	C			G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30755750					SNP	C	C	G	C	C	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51452930	NES14433144	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36052260 () rs orientation: forward

Symbol	Name	Function Class
Mccc1	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	within coordinates
Mccc1os	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand	1802 bp upstream
Rr575296	regulatory region 575296	1632 bp proximal
Rr575297	regulatory region 575297	1834 bp proximal