rs30756006 SNP Detail

Summary

• ID
  rs30756006
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170471210 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  TTCTGTTTGT CCTGGTGACT TCCCAGAATC AAACGCCTAC CACAGGGAAT GTCTCTTGCA
  ATCTCCGTGG TTTGGGACAA ATGGACAGGC CTCTCTATCT GGCCAGATAA TCTCTAAAGG
  GTATATACAT GTAATGGTGC GGTCCTCTTT TGGGCTCTTT AATTAGTGAC CCTGAATATG
  CCTACTATGA AGATTAATAA TGTGTCACTT TTGGAAAGAG CATTAAGTCT TCTGGGACAA
  TTGCCACTCT GAAATACTCA GCAGAGTCAG GTCGATTCTG AGGGACTCTA GCAGAGCTGA
  R
  CATGGCAGGC ATGGCTCTGG CAGGCCTTGC CTTCTCTTAG CCCATCTTCC TTGTTAAAAA
  CCGGTCCATT ACATTTCTAA AGCCAGCCAC CAAGATCTAG TCCCCCTTTT GGCCATTTCC
  TGCCCCCTGA GGCTATTAAG AGCCCCCCCT TTGGCTGCCC TAATTAATCT GTACAATCAA
  AAATAAACCC CTCATCTAAA CAGGGGGCTT CCCCTTTACC TTTATAAACT GTCATTTGCC
  TATGTGCCAC ATCTGCCTCC TCTCTATCCA GAGGCAGTGT TCCTTTCCCC TTCTCCTTCA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46440598	mCV22996149	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30756006					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170471210 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi995	CpG island 995	529 bp proximal
Olfml2b	olfactomedin-like 2B	891 bp upstream
Rr14047	regulatory region 14047	1010 bp distal
Rr28935	regulatory region 28935	190 bp proximal
Tssr280	transcription start site region 280	703 bp downstream
Tssr9927	transcription start site region 9927	790 bp downstream
Tssr9928	transcription start site region 9928	808 bp upstream
Tssr9929	transcription start site region 9929	849 bp upstream
Tssr9930	transcription start site region 9930	882 bp upstream
Tssr9931	transcription start site region 9931	931 bp upstream
Tssr9932	transcription start site region 9932	948 bp upstream
Tssr9933	transcription start site region 9933	1144 bp upstream
Tssr14922	transcription start site region 14922	687 bp downstream
Tssr14923	transcription start site region 14923	738 bp downstream