rs30758463 SNP Detail

Summary

• ID
  rs30758463
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:173154693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG AAGCATGACT GAGAACACGG
  R
  GTGACTAAAT ACGTGGGAGG CTCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
ss44961429	mCV23111139	ABI	CRAMUS_MOUSE	f	SNP		G	G			A		G
ss49757134	NES13025349	PERLEGEN	MM_PANEL2	f	SNP	G			G	G		G			A
ss146220315	ENSMUSSNP1838177	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G					G
ss320131729	CHEV_1_175257257	CHEVERUD	SCREENING_POP	f	SNP									G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
rs30758463					SNP	G	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49757134	NES13025349	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:173154693 () rs orientation: forward

Symbol	Name	Function Class
Rr423671	regulatory region 423671	1210 bp distal
Rr423672	regulatory region 423672	1428 bp proximal
Rr423673	regulatory region 423673	1784 bp proximal