rs30758473 SNP Detail

Summary

• ID
  rs30758473
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8544828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAC ATTCCTCTAC ACTGGGGCAT
  S
  GAGCCTTCAC AGAGCCTCTT CTCCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45960762	mCV24763425	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	G
ss132971084	ENSMUSSNP1242748	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321737006	CHEV_6_8494828	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30758473					SNP	C	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8544828 () rs orientation: forward

Symbol	Name	Function Class
Glcci1	glucocorticoid induced transcript 1	within coordinates
Gm45062	predicted gene 45062	within coordinates
Tssr54920	transcription start site region 54920	241 bp downstream
Tssr54921	transcription start site region 54921	497 bp upstream