rs30759348 SNP Detail

Summary

• ID
  rs30759348
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115435100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATCTTTTG TTAGTGTCCT
  TCCACCCCCA AATATTCCTC CCATTGTATT CTTTCTCTCT TCCTTTCTAT TAGTTGAATC
  TATTTCCTGA CAGTTTCATA CAAGTACATA GTTCATTTGG TTACTTGCAT CCCTTCCACC
  CTCTCTTACT CTCCCATCCC TCCCTCTCCT CCGTACAAGT CCCTTACCAG CTCCTGGTAT
  R
  TTGTTCTGTT TTGTGAACCA CTGATTTTAA CCAGGGCTAT CTGTGTGTCT GCAGAACTCT
  CCTCTGGAGC CTAGCTGGCT CACCTTGGGT ACACAACTGA AGACAATGAC TATCCCTTCC
  CAGAATCCAC CAGTCACTGA GAACCTTTTC CTGTCCGTGG TTAGCTGTTG ATAAGCCCAG
  TGTTGTGCAA TCCCGTGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45463561	mCV24998096	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135663623	ENSMUSSNP4502483	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs30759348					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115435100 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	within coordinates
Rr65099	regulatory region 65099	300 bp distal
Rr367536	regulatory region 367536	878 bp upstream
Rr367537	regulatory region 367537	1277 bp upstream
Tssr35264	transcription start site region 35264	59 bp downstream
Tssr35265	transcription start site region 35265	92 bp downstream