rs30760507 SNP Detail

Summary

• ID
  rs30760507
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:98980289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGTCCATT GGTAGAGGCA TGCGGGTTCA TGATTAGGGA
  GGACTTGGAA GGTGCCGAGG ACGAGACACA TGTGCTGGTC AGGTCTAGGC TGCTGTGGTT
  R
  CTGCTTGTGG TTTCCTCTGC AGTGTGGGCA CTTGTCACTT CTTTCCAGAG CTGCTGCAGT
  TCCGTTGGAA TCATGCCTGA AACAAACAAA TTGGATAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45961977	mCV23993343	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss133426045	ENSMUSSNP3841114	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30760507					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:98980289 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Foxp1	forkhead box P1			Coding-Synonymous
				Noncoding-Transcript-Variant
Rr635315	regulatory region 635315			1277 bp distal
Tssr57961	transcription start site region 57961			99 bp downstream