rs30760656 SNP Detail

Summary

• ID
  rs30760656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79367447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGAGAGA GAGAACTGAC
  TCCTATATGT GCACCCTGGC ACATGCATGC TCCTCCACAG ATCTACATAC ATAAAATAAA
  TAAATAAAAT GTGAGGAACA CGTGTGAGCA AAAGAGATGA GGAAAAGAAA GGACCTCCCA
  GTAGACAATG CTTCAAAGGA TGTTTGCCCT AGAGGAAGCT GGGTACAAGG CTGCTCCTCC
  Y
  GCAGCAGGGG ACATCTGAGT CGAAGCCCAC AGGTGACTTT TCATTCCTTG CATCCCCATG
  TTATGTTGTG CTTTGTGGCC TCCTCAGCAG CTCCTTCCTC TTGAAGGCAT ACTCCTTTTG
  CACCAAGCTT AAATCAGTCT TAGGAAACCA CAAGGCAGGT TCTTCAAGCA ACAGGTTCTG
  CAACTTACTG GGCTACTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45463675	mCV24555347	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30760656					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79367447 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	within coordinates
Spmip2	sperm microtubule inner protein 2	within coordinates
Tssr33692	transcription start site region 33692	1734 bp upstream
Tssr33693	transcription start site region 33693	1616 bp upstream
Tssr33694	transcription start site region 33694	1311 bp upstream