rs30761073 SNP Detail

Summary

• ID
  rs30761073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105841033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGGCTAT TATAAATAAG
  GCTGCTATGA ACATAGTGGA ACATTTGTCC TTATTACCAG TTGGAACATC ATTGAGAAGA
  GAGGCCTCTT GGTCTTGCAA ACTTTATATG CCCCAGTACA GGGGAATGCC AGGGCCAAGA
  AGTGGTAGTG GGTGGGTAGG GAAGCAGGGC AGGGGGAGGG TATAGGGAAC TTTCGGTATA
  R
  CATTTGAAAT GTAAATAAGG AAAATATCTA ATAAAAAATG AAAAGAAATT TACCTATTCA
  AACTTGCAAG TATTAAACAA TGTTATAGAA GAATTAAAAA AAAAAGATTT ATTTATTTAT
  TATATGTTAG TACACTGTAG CTGTCTTCAG ACACTCCAGA AGAGGGTGTC AGATTTTGTT
  ACAGATGGTT GTGAGCCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45464430	mCV23787387	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss135578671	ENSMUSSNP7207643	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30761073					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105841033 () rs orientation: forward

Symbol	Name	Function Class
I830077J02Rik	RIKEN cDNA I830077J02 gene	1053 bp upstream
Rr582817	regulatory region 582817	1064 bp distal
Rr582818	regulatory region 582818	700 bp distal
Rr582819	regulatory region 582819	1394 bp proximal
Tssr34938	transcription start site region 34938	1095 bp upstream
Tssr34939	transcription start site region 34939	1087 bp upstream
Tssr34940	transcription start site region 34940	1070 bp upstream
Tssr34941	transcription start site region 34941	1038 bp upstream
Tssr34942	transcription start site region 34942	1006 bp upstream