rs30761311 SNP Detail

Summary

• ID
  rs30761311
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:118625958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGATAAA TTAAGTGTGG
  ATAAGGATTA AATGAGAATT TTGTAATGGA GAAAACTTGT CTTTGCTCTT TAATTCAGTT
  GTAAGAGGGA AACCCTATAA AATATAAAGC AATGCCAGAG AGAAAGAGCT CACTCTAGTA
  GCATTACACA CAGAGATGCT AAGTTAGAGT ACTCCTTGCT TCCTGGTGTT TCTGTAGAAA
  R
  CACTCACCCT GTATTCAAGC ATATCTACCA CCATGCGCAC ATACAACGGA AGGCCTAGAA
  ACACTAGAAG CAAACGGAAT TCAACATGCT TCCCGCAGTG AAATGTACCT ATTGAAAATT
  GTTCATGAAT AGGTAGACTA TTTTGAGTAT CATTTCATTT TTCAAGTGTT GTTTTCCAAA
  CATGAAATGT CAAGATTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss46440666	mCV22548748	ABI	CRAMUS_MOUSE	f	SNP	A	G				A	A
ss47326102	NES11373511	PERLEGEN	MM_PANEL2	f	SNP		G	A	A	A		A	A	A	G	A	G
ss138901156	ENSMUSSNP2862791	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs30761311					SNP	A	G	A	A	A	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47326102	NES11373511	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:118625958 () rs orientation: forward

Symbol	Name	Function Class
Gm31626	predicted gene, 31626	within coordinates
Rr387829	regulatory region 387829	1839 bp downstream
Rr474254	regulatory region 474254	890 bp distal
Rr474255	regulatory region 474255	203 bp distal