rs30762615 SNP Detail

Summary

• ID
  rs30762615
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050492 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  ATTTCTCATT TTCCGTGATG TTTCAGTTTT CTCGCCATAT TCCAGGTCCT TACAGTCTGC
  ATTTCTCATT TTTCACGTTT TTTAGTGATT TCGTCATTTT TCAAGTCGTC AAGTGAATGT
  TTCTCATTTT CCATGATTTT CAGTTTTCTT GCCATATTCC ACGTCCTACA GTGAACATTT
  CAAATTTTCC ACCTTTTTCA GTTTTCCTCG CAATAGTTCA CGTCCTAAAC TGTGTATTTC
  TCATTTTCCG TGATTTTCAG TTTTCTCGCC ATATTCCAGG TCTTTCAGTG TGCAATTCTC
  W
  TTTTTCACGT TTTTTAGTGA TTTTGTCATT TTTCAAGTCG TCAAGTGGAT TTTTCTCATT
  TTCCATGATT TTCAGTTTTC TTGCCATATT CCATGTCCTA CAGTGGACAT TTCTAAATTT
  TCCACCTTTT TCAGTTTTCC TCGCCATATT TCACGTCCTA AAGTGTGTAT TTCTCATTTT
  CCATGATTTT CAGTTTTCTC GCCATATTCC AGGTCCTTCA GTGTGCATTT CTCATTTTTC
  ACGTATTTTA GTGATTTCGT CATTTTTCAA GTCGTCAAGT GGATGTTTCT CATTTTCCAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J
ss46441209	mCV25366154	ABI	CRAMUS_MOUSE	f	SNP	T	A
ss46469465	mCV22822222	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J
rs30762615					SNP	?	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050492 () rs orientation: reverse

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1834 bp downstream
Tssr4285	transcription start site region 4285	1809 bp upstream
Tssr4286	transcription start site region 4286	1705 bp downstream
Tssr4287	transcription start site region 4287	1670 bp upstream
Tssr4288	transcription start site region 4288	1642 bp downstream
Tssr4289	transcription start site region 4289	1547 bp upstream
Tssr4290	transcription start site region 4290	1540 bp downstream
Tssr4291	transcription start site region 4291	1460 bp upstream
Tssr4292	transcription start site region 4292	1424 bp downstream
Tssr4293	transcription start site region 4293	1389 bp upstream
Tssr4294	transcription start site region 4294	1387 bp downstream
Tssr4295	transcription start site region 4295	1314 bp upstream
Tssr4296	transcription start site region 4296	1351 bp downstream
Tssr4297	transcription start site region 4297	1287 bp upstream
Tssr4298	transcription start site region 4298	1269 bp downstream
Tssr4299	transcription start site region 4299	1229 bp downstream
Tssr4300	transcription start site region 4300	1191 bp downstream
Tssr4301	transcription start site region 4301	1173 bp upstream
Tssr4302	transcription start site region 4302	1161 bp upstream
Tssr4303	transcription start site region 4303	1106 bp downstream
Tssr4304	transcription start site region 4304	1077 bp upstream
Tssr4305	transcription start site region 4305	1008 bp downstream
Tssr4306	transcription start site region 4306	989 bp upstream
Tssr4307	transcription start site region 4307	968 bp downstream
Tssr4308	transcription start site region 4308	936 bp upstream
Tssr4309	transcription start site region 4309	892 bp upstream
Tssr4310	transcription start site region 4310	845 bp downstream
Tssr4311	transcription start site region 4311	817 bp upstream
Tssr4312	transcription start site region 4312	737 bp downstream
Tssr4313	transcription start site region 4313	678 bp upstream
Tssr4314	transcription start site region 4314	666 bp downstream
Tssr4315	transcription start site region 4315	642 bp downstream
Tssr4316	transcription start site region 4316	615 bp upstream
Tssr4317	transcription start site region 4317	539 bp downstream
Tssr4318	transcription start site region 4318	515 bp upstream
Tssr4319	transcription start site region 4319	458 bp upstream
Tssr4320	transcription start site region 4320	394 bp downstream
Tssr4321	transcription start site region 4321	366 bp upstream
Tssr4322	transcription start site region 4322	267 bp downstream
Tssr4323	transcription start site region 4323	232 bp upstream
Tssr4324	transcription start site region 4324	202 bp downstream
Tssr4325	transcription start site region 4325	151 bp downstream
Tssr4326	transcription start site region 4326	113 bp upstream
Tssr4327	transcription start site region 4327	110 bp downstream
Tssr4328	transcription start site region 4328	28 bp downstream
Tssr4329	transcription start site region 4329	30 bp upstream
Tssr4330	transcription start site region 4330	73 bp upstream
Tssr4331	transcription start site region 4331	97 bp downstream
Tssr4332	transcription start site region 4332	203 bp downstream
Tssr4333	transcription start site region 4333	215 bp upstream
Tssr4334	transcription start site region 4334	237 bp downstream
Tssr4335	transcription start site region 4335	384 bp downstream
Tssr4336	transcription start site region 4336	388 bp upstream
Tssr4337	transcription start site region 4337	461 bp downstream