rs30763124 SNP Detail

Summary

• ID
  rs30763124
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164265268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             CAGTTCCCCC ATGACAGCCC ACCCCCCAGC CCCAGGAAAT AAAGAAAAAA
  W
  AAAAATAATA ATAAAGACCT GATACCACAG GAAGAGACTA TGGAGTGTGT           
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44962679	mCV24721520	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
ss145978554	ENSMUSSNP987100	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30763124					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164265268 () rs orientation: forward

Symbol	Name	Function Class
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	within coordinates
Nme7	NME/NM23 family member 7	398 bp downstream
Tssr9784	transcription start site region 9784	776 bp upstream
Tssr14731	transcription start site region 14731	274 bp upstream
Tssr14732	transcription start site region 14732	40 bp downstream
Tssr14733	transcription start site region 14733	149 bp downstream
Tssr14734	transcription start site region 14734	177 bp downstream
Tssr14735	transcription start site region 14735	245 bp downstream
Tssr14736	transcription start site region 14736	278 bp downstream
Tssr14737	transcription start site region 14737	341 bp downstream
Tssr14738	transcription start site region 14738	476 bp downstream
Tssr14739	transcription start site region 14739	642 bp downstream
Tssr14740	transcription start site region 14740	696 bp downstream
Tssr14741	transcription start site region 14741	725 bp downstream
Tssr14742	transcription start site region 14742	832 bp downstream