rs30766416 SNP Detail

Summary

• ID
  rs30766416
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70836391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAATTAA CTTTTCAAAT
  AGCTTCTTGC AAGGCTGCTG AATGAAGTGA CCAGGGACAT GCACTTCCAG AAAAAAGGGG
  CCTAAACACA AACTGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGGAG AGAGAGGAGA
  GAGAGAAGGT AAAAGAGAGA GCGCAAGCAA GCTAGCTTTG CATGGAAACA ACTCTTCCAT
  K
  CAAAGCCCCT CCGGCAGGCT GAAGTCCCTA ACTCAAGGTC AGCTGGCTCA GTGGCTTGAG
  ATAAGCCTGC AGAGGGCTAC TTCCGGGTTC TCGCGACCAC CCACCCCTGC AAAGGTCTCT
  ATCACCTTCT TCCTGGGACT TATGTCACTC AGGGCTGCAA CTCCCATGCT AAGAGGGAAC
  TCAGTGCGGG AACCCCTGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss39218964	mCV25205791	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs30766416					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70836391 () rs orientation: forward

Symbol	Name	Function Class
B930095I24Rik	RIKEN cDNA B930095I24Rik gene	464 bp upstream
Cpgi6702	CpG island 6702	137 bp proximal
Fhip2b	FHF complex subunit HOOK interacting protein 2B	Intron
Rr369865	regulatory region 369865	495 bp upstream
Rr494968	regulatory region 494968	within coordinates
Rr494969	regulatory region 494969	874 bp proximal
Tssr4471	transcription start site region 4471	607 bp downstream
Tssr129613	transcription start site region 129613	850 bp downstream
Tssr129614	transcription start site region 129614	862 bp downstream
Tssr129615	transcription start site region 129615	881 bp downstream