rs30771204 SNP Detail

Summary

• ID
  rs30771204
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47413800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGGGACC TCATGTTGCT
  TCATAGTTCA TAGGACCAGT TTCCTTTCTC CTAACAAAAC CTGTCAGCCA GCAACCCCAG
  CCAATGACCT TGCCCATCCC TCAGTCCCCC CAAACTTTAT GAGCCTTCAG TCACCCTAAG
  TAAAGTTGAT CTGCCTACTG AGTGCGGGTC CAGTGTGGCT TATTCACTCA GGGCTTCTGA
  R
  CCCCAACCCC TTTCATAACC TCTACTCCCT CTGCCCTCAT GGACTGTATG GGCAGCGGTC
  CACTAGAGCA GGGCTCCCTC TGTCCTCATG GACTGTATGG GCAGCGGTCC ACTAGAGCAG
  GGCTCCCTCT GCTCTCATGG ACTGTATGGG CAGCGGTCCA CTAGAGCAGG GCTCCCTCTG
  CCCTCATGGA CTGTATGGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39219105	mCV23302186	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30771204					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47413800 () rs orientation: forward

Symbol	Name	Function Class
Gch1	GTP cyclohydrolase 1	within coordinates
Gm18811	predicted gene, 18811	1540 bp downstream
Rr491339	regulatory region 491339	1466 bp proximal
Tssr128307	transcription start site region 128307	679 bp upstream
Tssr128308	transcription start site region 128308	961 bp downstream
Tssr128309	transcription start site region 128309	1495 bp downstream
Tssr128310	transcription start site region 128310	1532 bp downstream