rs30775922 SNP Detail

Summary

• ID
  rs30775922
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:14013197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCAGCCGGAC GGGCACCTGT CCTCTGGTCC GGAAGGTGGC CGGCTGTCCC CGGCCCACGC
  AGAGTGCTGC CTCAGCGCCT CTGTGCTTCC GCCTGTTCCA GAAGCTGTCA GGTTCTCTGG
  CGCACCCTCT CACCTGTTCA GACTAATTTC CTAAGTTCGG CGGGTCCCGG ACCAAGATGG
  CGACCGCTGC TGCTGTGGCT TAGGTCGCCT CCCCAGCCGG GCGGGCACCT GTCCTCCAGT
  CCGGAAGGTG GCCGGCTGTC CCCGGCCCAC ACAGGGTGCT GCCTCAGCCC CTCTGTGCTT
  Y
  TGCCTGTTCC AGAGGCTGTC AGGTTCTCTG GCGCACCCTC TCACCTGTTC AGACTAATTT
  CCTAAGTTCG GCGGGTCCCG GACCAAGATG GCGACCGGCT TCTCATTCTT AAGCTGGTCC
  AAGAACCAGG GCTTTAGACT TCCCCATGCC TCTCAATTCC ATATGAGTTT ATTTGCCACC
  TGATGGAGAA GTCTGCCCTC TGTCCTAACT CCCATGGCTA TGAACTTGGC TCATCCCTCC
  TGTGTTCTCC CTGTACTCTG CCAAGGATCT GTGCTCCCAG TGTTCATTGG CTTCCTTGAC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss46443639	mCV25349809	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs30775922					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:14013197 () rs orientation: forward

Symbol	Name	Function Class
1700019J19Rik	RIKEN cDNA 1700019J19 gene	within coordinates
Rr199406	regulatory region 199406	404 bp proximal