rs30785019 SNP Detail

Summary

• ID
  rs30785019
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26838318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCTGGGC TGCACCTGTT CAGTCTCTTT CTTGAACTCC
  GAAAACAGGA GTGCTGAACT CCTGGGAATC CTCTGGAAAA TGACACTGCA AGAAGCCTGT
  S
  TGCCACAGAA GTGGAGTCTG AATCACCTGT GGGTAATAAA GGGTCCTCAC CCCTCTCGGG
  ACAAACCCAC ACTTAGGGGG AGTGGAGATG GTGCATGTGT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss49170859	NES12493515	PERLEGEN	MM_PANEL2	f	SNP	G	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30785019					SNP	G	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49170859	NES12493515	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26838318 () rs orientation: forward

Symbol	Name	Function Class
Arhgef3	Rho guanine nucleotide exchange factor 3	within coordinates
Cpgi6253	CpG island 6253	902 bp distal
Rr296929	regulatory region 296929	within coordinates
Tssr124726	transcription start site region 124726	1467 bp downstream
Tssr124727	transcription start site region 124727	1452 bp downstream
Tssr124728	transcription start site region 124728	1160 bp downstream