rs30786098 SNP Detail

Summary

• ID
  rs30786098
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26814536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGAGGTG GAGAACCTAG
  GGCTCGGGGA GGTCACGTAA CTAGGAAGGA GAAAAAAAAC CTCTAGCCAA GTCACTAGCA
  AATCAATGGC CCTGGATTTT TAATTTTGTT TGTATGTATG TGATGGATGG ATGGATGCAT
  GCATGCATTT TTTAATAAAC AAAAGACCAG GGTTAAATAG AAACCTGAAA ATGAGCATCA
  Y
  GAACAGAGTA TGGCCAGAAC AATGGGAAAG GCTTTGTGGA TGCTTGACGC TGTGCACTCT
  CTACCTGTCC TGTGTGTGCT GGGTCCAGTC GTAGCCTAGT TCTTCTGTGG TCCTGCAGCT
  TTACCGCTGC ACTTCTGGGA GCATCTGCTC AAGTTAGATA TGACAGATGA GTGCAGACGA
  GCCCCAGCTC TTCTCTCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49170945	NES12494494	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30786098					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49170945	NES12494494	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26814536 () rs orientation: forward

Symbol	Name	Function Class
Il17rd	interleukin 17 receptor D	within coordinates
Tssr124725	transcription start site region 124725	803 bp downstream