rs30789822 SNP Detail

Summary

• ID
  rs30789822
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:87407200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG AAATGCTGGA CAAACCATGA
  Y
  GACTTTCAAT GAATTACTTA ATATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45964396	mCV22564856	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss133363461	ENSMUSSNP2088753	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321849199	CHEV_6_87380212	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30789822					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:87407200 () rs orientation: forward

Symbol	Name	Function Class
Bmp10	bone morphogenetic protein 10	within coordinates
Gm66434	predicted gene, 66434	within coordinates
Tssr57543	transcription start site region 57543	1218 bp downstream
Tssr57544	transcription start site region 57544	1131 bp downstream