rs30796132 SNP Detail

Summary

• ID
  rs30796132
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:38105126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT TGGAATCCCA AGCCTCAAAC
  R
  TCTTTCAGGG ACCTTCAGTA AGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44963370	mCV27587537	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss146361556	ENSMUSSNP2158959	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss325801281	CHEV_19_38191168	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30796132					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:38105126 () rs orientation: forward

Symbol	Name	Function Class
Rbp4	retinol binding protein 4, plasma	mRNA-UTR
Tssr156244	transcription start site region 156244	72 bp upstream
Tssr156245	transcription start site region 156245	1637 bp upstream
Tssr159111	transcription start site region 159111	95 bp downstream
Tssr159112	transcription start site region 159112	134 bp downstream
Tssr159113	transcription start site region 159113	189 bp downstream
Tssr159114	transcription start site region 159114	1629 bp downstream
Tssr159115	transcription start site region 159115	1668 bp downstream
Tssr159116	transcription start site region 159116	1704 bp downstream
Tssr159117	transcription start site region 159117	1802 bp downstream