rs30796192 SNP Detail

Summary

• ID
  rs30796192
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55295069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGTTCCA ATTGTTGGCT
  GCCATATGTT TCTGAAACCT TCCTGTGGAG AACCATGAGT TTAAAAGTGT TGCTCACTCG
  ATGTCCTCCA TGTCTCTGCG AGATCTACAT GGATTTTGTG GTGATAGAGA GATAGATCTT
  ACTCATCTGT CTTTTGGAGA CCTGGGTTGT GAAGCAAGAG TCATCAGTGT GCAGGGCAGG
  R
  CCCATGGCAG GATTGGCAAA CACCCCAGAA TCTGTAGATA GATTCGCTGC TGAGGTTTGA
  GTTGTTTGGT GGGATATGTC CAGTATTCTT CAAGGTCAGT GGAGAAGATA TTGTGCAGGG
  TTTGTCATTA TGAGAAAAGG ACTATGGAGT TATAGATGCG GGGCAACATC TGTGAGCCTC
  TGCTGACCAC TCATATCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39223251	mCV25265938	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	A
ss139576751	ENSMUSSNP5012909	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
ss324641949	CHEV_14_55676449	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30796192					SNP	G	G	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55295069 () rs orientation: forward

Symbol	Name	Function Class
Rr492413	regulatory region 492413	1479 bp distal
Rr492414	regulatory region 492414	1269 bp proximal
Tssr125747	transcription start site region 125747	1934 bp downstream
Tssr125748	transcription start site region 125748	1737 bp downstream