rs30796831 SNP Detail

Summary

• ID
  rs30796831
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60672003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG TTTCTATGTT CAAATTTCAA
  Y
  ATGATTCTCC CAAATTCTTA ATGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss45467005	mCV25046582	ABI	CRAMUS_MOUSE	f	SNP	C	T			T
ss46985502	NES10789819	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	T		C	T	C
ss135220617	ENSMUSSNP4581967	ENSEMBL	ENSEMBL_Sanger	f	SNP	C				T
ss320787142	CHEV_3_60568504	CHEVERUD	SCREENING_POP	f	SNP						C				C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs30796831					SNP	C	T	T	T	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985502	NES10789819	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60672003 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577451	regulatory region 577451	1404 bp distal
Rr577452	regulatory region 577452	1493 bp distal
Rr577453	regulatory region 577453	662 bp proximal