rs30797604 SNP Detail

Summary

• ID
  rs30797604
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60670000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCCTTAT TCCTATAATC
  TTCCTATAAT TCCTATAGTC TGTATTAAAA CCTTGCTTTA ACTAAGTCAG TCATTGCCAG
  CAGCATCTGA TTGAAGAGCT ATACTTGAGC TCTGCTTTTC ACTCTGGCGG CTTCAGAAAC
  CAAGAAGAAA CCCGAAGAAG AAATTCCTAA AGCTCAGCAG CCTAGAGATG AATTGGCAGG
  R
  ATGTCTGCTG GGAGAAGACA GTATCACAGG GAATTTGTTA TCTGCAGCCT TCCTTTCTTT
  CTTCTGCTTC TGACTTAGTT CATTTTTCTT CTGGGAAAGT CTTCCTGTTC AGGAAGAAGG
  AAGAAATGAG GAAGCAGGTC TTAGTGCCTA CCCGAGTAAA TTCTAGGAAC TGTTCTGCCA
  TGGAGGTGAA AATACAATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46985480	NES10789850	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30797604					SNP	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46985480	NES10789850	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60670000 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577451	regulatory region 577451	326 bp proximal
Rr577452	regulatory region 577452	489 bp proximal