rs30798372 SNP Detail

Summary

• ID
  rs30798372
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:153633625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTC CTGAGTTCAA TTCCCAGCAA
  Y
  CACATGGTGG CTCACAACCA TCTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45466338	mCV23502241	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss136115067	ENSMUSSNP2256048	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss321031814	CHEV_3_153590952	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30798372					SNP	T	T	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153633625 () rs orientation: forward

Symbol	Name	Function Class
Acadm	acyl-Coenzyme A dehydrogenase, medium chain	Intron
Rr587798	regulatory region 587798	34 bp proximal
Rr587799	regulatory region 587799	425 bp proximal
Tssr36251	transcription start site region 36251	1642 bp downstream