rs30798973 SNP Detail

Summary

• ID
  rs30798973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57173577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAATCTGAAA GAGTCAGATG CAGATATTTG CATCCAACCA ACAACAGAAA CTGCTGACCC
  AGGTGGTTGA ATTGGAGAAA GGCTGGAAGA AGCTGAGGAG GGGGACAACC CTGTAGGAAG
  ACCAGCAGTC TCAATTAACC TGGACCTCCA AGATCTCTCA AACACTGGAC CACCAACCAG
  GCAGCATGCA CCAGCTGATA TGAGGCCCCC AACACATATA CAACAGAGGA CTGCCAAGTC
  TAGGTTCAGT CAGAGAAGAT ATAACTAACC CTACAGAGAC TGGAGGACCT AGGGAGCTTA
  R
  AAGTCTGGTT GGGGTGGGGT TGGGGATGGG ACATCCTCGT GGAGACAGAG GGGTGGGGAG
  GAGATAAGGA ATGTGGAACA GTCGGAGGGT GAATGGAGGA GGGGGGGTTA GATCTGGAGT
  GTAAATAAAT AAATAAATGA TTAAAACAAA CTAAGTTGTC TTAACTTTAA AATCTGACAG
  ACCTAGTCTC TGACATCTCA TTCACATGTG TAAATTACTG ATCTAATAGG GTTGTCATTT
  GTCTATACCG TTATGCATTC AAGATCAGGA GTGGCAGATG ATGCTGGCTC AGACCCCCTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45465958	mCV24478967	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30798973					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57173577 () rs orientation: forward

Symbol	Name	Function Class
Rr577074	regulatory region 577074	1474 bp proximal
Rr577075	regulatory region 577075	1582 bp proximal