rs30799371 SNP Detail

Summary

• ID
  rs30799371
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61552825 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  TTGCATTACC TCACTCAGGA TGATGCCCTC CCGGTCCATC CATTTGCCTA GGAATTTCAT
  AAATTCATTC TTTTTAATAG CTGAGTAGTA CTCCATTGTG TAAATGTACC ACATTTTTAT
  ATCCATTCCT CTATTGAGGG GCATCTGGGT TCTTTCCAGC TTCTGGCTAT TATAAATAAG
  GCTGCTATAA ACATAGTGGA GCATGTGTCT TTCTTACCAT TTGGAACATC TGCTGGATGT
  ATGCCCAGAA GAGGTATTGC TGGATCCTCC TATAGTACTA TGTCCAATTT TCTGAGGAAC
  M
  GCCAGACTGA TTTCCAGAGT GGTTGTACAA GCTTGCAATC CCACCAACAA TGGAGGAGTG
  TTCCTCTTCC TCCACATCCA TGCTTGCATC TACTGTCACC TGAATATTTG ATCTTAGCCA
  TTCTGGCTGG TGTGAAATGG AATCTCAGGT TTGTTTTGAT TTGTAATTCC GTGAGGATTA
  AGGATGTTGA ACATTTTTTC AGGTGCTTCT CAGCCATTCG GTATTCCTCA GGTGAGAATG
  CATTGTTTAG CTCTGAGCCT CAATTTTTAA TGGGGTTATT TGATTTTCTG GAGTCTATCT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45466350	mCV23619892	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30799371					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61552825 () rs orientation: reverse

Symbol	Name	Function Class
Rr375072	regulatory region 375072	1852 bp downstream