rs30801807 SNP Detail

Summary

• ID
  rs30801807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:52108492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGACTGAGGG CTTGCCTCAT GCCTATGAGG TAAGCGCTCT ACCTCTGAGA TATAATCCCA
  GCCATTTCCT GTTTCTAATT TCTAAAATAA ACTTTATCTC AGGCATGCAT GTCTGGAGAA
  ACAAAACGTT GTGTAGCTCA GCTCATTACT ACCTATCATT TCAAACATGG ACTGGAGATA
  AGAAACCTAT TCCCCATAAC TGAGCATGGC GGTGCGTGGC TTTAATCCCA GCACTTGGAT
  GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA
  R
  AAAGAAAGAA AGAAAGAAAG AAAAAAAGAA AGAAAGAAAG AAAGAAAGAA GGAAAAAAAG
  AAAGAAAGAA AGAAGGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG
  AAGCAAGCTT ATTCCTTATG GAATTATATT TTTAAATGCT ATTTTTTTAG CTTTGTGCTA
  CATTCTACAT GAGGAATTTG TTGTTGTTGT TGTTGTTGTT GTTGTTTTTA ACAAGTAGAA
  GCAATTTATG AACCCAGCAT CCTTTGTCCT AATGCTTCTT GTTGGCAGCT GCCACCTGTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45965209	mCV22670262	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30801807					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:52108492 () rs orientation: forward

Symbol	Name	Function Class
Rps19-ps14	ribosomal protein S19, pseudogene 14	266 bp downstream