rs30803310 SNP Detail

Summary

• ID
  rs30803310
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050411 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  TATTCCACGT CCTACAGTGG ACATTTCTAA ATATTCCACC TTTTTCAGTT TTCCTTGCCA
  TATTTCACGT CCTAAAGTGT GTATTTCTCA TTTTCCGTGA TTTTCAGTTT TCTCGCCATA
  TTCCAGGTCT TTCAGTGTGC ATTTCTCATT TTTCACCTTT TTTAGTGATT TCGTCATTTT
  TCAAGTCGTC AAGTGGATGT TTTTCATTTT CCATGATTTT CAGTTTTCTT GCCATATTCC
  AAGTCCTACA GTGGACTTTT CTAAATTTTC CACCTTTTTC AGTTTTCCTC GCCATATTTC
  M
  CGTCCTAAAG TGTGTATTTC TCATTTTTCG TGATTTTCAG TTTTCTCGCC ATATTACAGG
  CCCTTCAGTG TGCATTTCTC ATTTTTCACG TTTTTTACTA ATTTCGTCAT TTTTCAAGTC
  GTCAAGTGGA TGTTTCGCAT TTTCCATGAT TTTCAGTTTT CTTGCCATAT TTCACGTCCT
  ACAGTGACAT TTCTAAATAT TCCACCTTTT TCAGTTTTCC TCGCCATATT TCACGTCCTA
  AAGTGTGTAC TTCTCATGTT CCGTAATTTT AAGTTTTCTC GCCATATTCC AGGTCTTTCA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46445891	mCV25356904	ABI	CRAMUS_MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30803310					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050411 () rs orientation: reverse

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1915 bp downstream
Tssr4285	transcription start site region 4285	1890 bp upstream
Tssr4286	transcription start site region 4286	1786 bp downstream
Tssr4287	transcription start site region 4287	1751 bp upstream
Tssr4288	transcription start site region 4288	1723 bp downstream
Tssr4289	transcription start site region 4289	1628 bp upstream
Tssr4290	transcription start site region 4290	1621 bp downstream
Tssr4291	transcription start site region 4291	1541 bp upstream
Tssr4292	transcription start site region 4292	1505 bp downstream
Tssr4293	transcription start site region 4293	1470 bp upstream
Tssr4294	transcription start site region 4294	1468 bp downstream
Tssr4295	transcription start site region 4295	1395 bp upstream
Tssr4296	transcription start site region 4296	1432 bp downstream
Tssr4297	transcription start site region 4297	1368 bp upstream
Tssr4298	transcription start site region 4298	1350 bp downstream
Tssr4299	transcription start site region 4299	1310 bp downstream
Tssr4300	transcription start site region 4300	1272 bp downstream
Tssr4301	transcription start site region 4301	1254 bp upstream
Tssr4302	transcription start site region 4302	1242 bp upstream
Tssr4303	transcription start site region 4303	1187 bp downstream
Tssr4304	transcription start site region 4304	1158 bp upstream
Tssr4305	transcription start site region 4305	1089 bp downstream
Tssr4306	transcription start site region 4306	1070 bp upstream
Tssr4307	transcription start site region 4307	1049 bp downstream
Tssr4308	transcription start site region 4308	1017 bp upstream
Tssr4309	transcription start site region 4309	973 bp upstream
Tssr4310	transcription start site region 4310	926 bp downstream
Tssr4311	transcription start site region 4311	898 bp upstream
Tssr4312	transcription start site region 4312	818 bp downstream
Tssr4313	transcription start site region 4313	759 bp upstream
Tssr4314	transcription start site region 4314	747 bp downstream
Tssr4315	transcription start site region 4315	723 bp downstream
Tssr4316	transcription start site region 4316	696 bp upstream
Tssr4317	transcription start site region 4317	620 bp downstream
Tssr4318	transcription start site region 4318	596 bp upstream
Tssr4319	transcription start site region 4319	539 bp upstream
Tssr4320	transcription start site region 4320	475 bp downstream
Tssr4321	transcription start site region 4321	447 bp upstream
Tssr4322	transcription start site region 4322	348 bp downstream
Tssr4323	transcription start site region 4323	313 bp upstream
Tssr4324	transcription start site region 4324	283 bp downstream
Tssr4325	transcription start site region 4325	232 bp downstream
Tssr4326	transcription start site region 4326	194 bp upstream
Tssr4327	transcription start site region 4327	191 bp downstream
Tssr4328	transcription start site region 4328	109 bp downstream
Tssr4329	transcription start site region 4329	111 bp upstream
Tssr4330	transcription start site region 4330	within coordinates
Tssr4331	transcription start site region 4331	16 bp downstream
Tssr4332	transcription start site region 4332	122 bp downstream
Tssr4333	transcription start site region 4333	134 bp upstream
Tssr4334	transcription start site region 4334	156 bp downstream
Tssr4335	transcription start site region 4335	303 bp downstream
Tssr4336	transcription start site region 4336	307 bp upstream
Tssr4337	transcription start site region 4337	380 bp downstream