rs30807297 SNP Detail

Summary

• ID
  rs30807297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136073250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCATGGAA GCTGATGCCC CCCACCAGTA
  TAGAGAAATA AGCCTAGGGA GCCCTGgagt tatctatagg agatgagtgc cctgtttctg
  agagtgtcta agctagggct acagaaacac ttggtagctg aaatgtttcc tgcgtccgat
  R
  ggGCCTAAGA TCTCAGACCT TGGCTGATTC TAGCCCTGGC CTGGTCACAT CGCCAGTCTA
  AACTTCATCT GCAAAGTGGG CTTGACATCT CTCCTTTCTT AGGGGCTAGT AAGTCTGGCA
  TGGAAGCCTG ACCCTGGCAC ATGGCGAGAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss44966413	mCV27592251	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss145553472	ENSMUSSNP3548295	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss319994868	CHEV_1_138042089	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30807297					SNP	A	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136073250 () rs orientation: forward

Symbol	Name	Function Class
Kif21b	kinesin family member 21B	within coordinates
Rr19444	regulatory region 19444	850 bp distal
Rr30732	regulatory region 30732	552 bp proximal
Rr407175	regulatory region 407175	1710 bp distal
Tssr9046	transcription start site region 9046	277 bp downstream
Tssr9047	transcription start site region 9047	1037 bp upstream
Tssr9048	transcription start site region 9048	1140 bp upstream