rs30807615 SNP Detail

Summary

• ID
  rs30807615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7430019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGC TTGATTTTAT GAAAATGAGT
  R
  CAGAGATGCA CTAAGCTGTC TCAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45467332	mCV23345017	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss134555725	ENSMUSSNP43267	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30807615					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7430019 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12953	CpG island 12953	1323 bp proximal
Pkia	protein kinase inhibitor, alpha	1710 bp upstream
Rr573236	regulatory region 573236	196 bp proximal
Rr573237	regulatory region 573237	1221 bp proximal
Rr573238	regulatory region 573238	1722 bp proximal
Tssr814	transcription start site region 814	1698 bp upstream
Tssr28292	transcription start site region 28292	1630 bp upstream
Tssr28293	transcription start site region 28293	1639 bp upstream
Tssr28294	transcription start site region 28294	1714 bp upstream
Tssr28295	transcription start site region 28295	1743 bp upstream