rs30807665 SNP Detail

Summary

• ID
  rs30807665
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3770378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAC AAAGGAAACT GCCTTATTTA
  M
  ATATAGTTCA TGCCACTGTA CTCTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss39223676	mCV24347127	ABI	CRAMUS_MOUSE	f	SNP	C	C	A				A		C
ss51192216	NES14311515	PERLEGEN	MM_PANEL2	f	SNP			A	A	A	A		C		A	A	A	A
ss139182377	ENSMUSSNP6751669	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs30807665					SNP	C	C	A	A	A	A	A	C	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51192216	NES14311515	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3770378 () rs orientation: forward

Symbol	Name	Function Class
6820402I19Rik	RIKEN cDNA 6820402I19 gene	509 bp downstream
Rr389165	regulatory region 389165	1777 bp upstream
Ube2e2	ubiquitin-conjugating enzyme E2E 2	within coordinates