CTTCTTAGAC TCTGAACAAA AGAAGCAAAT GCTGACTATC CTGCCTCCTC CCTGAAGCTT CCACATTATA AAAAAGAAAC AAAAAAACAA AAAAACCCCC S AAAAACCCCC AAAACCCAAA ACCCCCAAAC CAAAAAAAAC CCAAAACATC AAACAAACAA AACCCAGTCT GTTACACAAG ATTGTGACCA ATGGTACAT S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss44966531 | mCV24592122 | ABI | CRAMUS_MOUSE | f | SNP | C | C | C | G |
ss146199161 | ENSMUSSNP1977947 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs30808103 | SNP | C | C | C | G |
Location: Chr1:172525035 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Crp | C-reactive protein, pentraxin-related | 588 bp upstream | ||||||
D1Mit149 | DNA segment, Chr 1, Massachusetts Institute of Technology 149 | 1761 bp proximal | ||||||
D1Mit149.1 | DNA segment, Chr 1, Massachusetts Institute of Technology 149.1 | 1609 bp proximal | ||||||
Rr423653 | regulatory region 423653 | 58 bp proximal | ||||||
Rr423654 | regulatory region 423654 | 426 bp proximal | ||||||
Tssr10246 | transcription start site region 10246 | 578 bp upstream | ||||||
Tssr10247 | transcription start site region 10247 | 1521 bp upstream | ||||||
Tssr10248 | transcription start site region 10248 | 1587 bp upstream | ||||||
Tssr10249 | transcription start site region 10249 | 1611 bp upstream | ||||||
Tssr10250 | transcription start site region 10250 | 1666 bp upstream | ||||||
Tssr10251 | transcription start site region 10251 | 1722 bp upstream | ||||||
Tssr10252 | transcription start site region 10252 | 1788 bp upstream | ||||||
Tssr10253 | transcription start site region 10253 | 1837 bp upstream | ||||||
Tssr10254 | transcription start site region 10254 | 1902 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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