rs30810639 SNP Detail

Summary

• ID
  rs30810639
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137548717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTGAGCATG AGGCTTCTCT TATGATGAAG AAAGTCAACT GGAGCCAAGT CAGAGCCAGA
  TCGAGTGGCC AAAGCAGTGC ACACAGAGCA AAAAGGGTCA GAGGTGGCTG TGTGGAGCCA
  CCGGAGGGCC ACTTAAGGAC TCAGGTGAGA GACGACATTT AGGAACATGT AAGATTCAAA
  TCTATATAGT CCAACCGGTA TCACGTCTCC TGGAGCAGAC TGGATCAGAA GGGAGTGCTT
  TCTCAGGGGA CTAAGATGAT ACAGGATGCC TGGCCTTGCT TTCCTTCCCA ACAGGACACA
  S
  TGCACATAAT GGCCCTGGTG CCCCACAGGG TGGGGAGGTG CCTCAGTCAA TAAAGTCCTT
  GCTGAGCAAG CATGGGGACT TTCGTTAAGC CCCCAAAATC AGCATTTTAA AACCCAGGCA
  GGAGCTGGAT AGACGGCTCA GTAACTAGAA GCACTGACCA CTTCTATAGA GGACCCAATT
  TTGGTTCCCA GCAACAAGAC GCTTATTTCG GTTTGTAATA ACCTATAACT GCAGTTCTAG
  GTGATCCAAT GCCCTCTTCT AGCCTCTGAG GGCACCAGGC ATGCTTGTGG TGCACAGACA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45967632	mCV24060116	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30810639					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137548717 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640223	regulatory region 640223	1844 bp distal
Rr640224	regulatory region 640224	713 bp distal
Rr640225	regulatory region 640225	212 bp distal
Rr640226	regulatory region 640226	373 bp distal
Tssr63894	transcription start site region 63894	959 bp upstream
Tssr63895	transcription start site region 63895	911 bp upstream
Tssr63896	transcription start site region 63896	888 bp upstream
Tssr63897	transcription start site region 63897	687 bp upstream
Tssr63898	transcription start site region 63898	665 bp upstream