rs30812355 SNP Detail

Summary

• ID
  rs30812355
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136539537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTGCCAAG AGAGCTGCGA
  TTGGATCAGA GCAATGCTTG ATTCACATTG GCTGGCTGTG CGCTCTCATT CTCATCCCCC
  GGAGCTCGGT GACCTGAGAA GAGTTTTCAT ATCTAATTGC CTTTAATGAT GGGGGCTGAA
  GACCCAGTGA TAGTGCAGTC ATGAGAGCAA AAACTGTAGT CATCCCGGGG AAGTGTTCCC
  M
  GGAACTGGCA TCCACCATTC TTGTCTCGGG GGATGTTATA GCTGCTTTGC GATGAGTTTG
  AAGATATTTA GGATTTTCTG CATTTAAAAG GCATTTCCTG CTTTGAAAAT GATGTCTATT
  TCAGGTTAGA ATAAAACCCC ATCTCCTTTC TGCCCTGAAG TGCTGAGGAG GCATTTAGAG
  CAGGAGATAG TTCTCTGTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	MOLF/EiJ
ss46986625	NES10885972	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	MOLF/EiJ
rs30812355					SNP	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46986625	NES10885972	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136539537 () rs orientation: forward

Symbol	Name	Function Class
Gm66095	predicted gene, 66095	within coordinates
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	Intron
Rr585882	regulatory region 585882	104 bp proximal