rs30814717 SNP Detail

Summary

• ID
  rs30814717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70702856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCCTCTGG CAACGCTGTC
  ACTGTAGTGA GGAGACCAGC AAGCAGTTCT TCATGTTCAC AGTGAAGGCC AGTTGGCCTG
  TCGCCCCCTG AGTCCAGGCT GTCTCAGAAG CTCCCCATCT TGGTCCAGAG GGTGAGGCTG
  CCTGCAGGCT CGGTGGGTGG TGTAAGGAGA AAGAGGTTGT GATCCTGTAG CCAGCTGATC
  R
  TTCGCTTACC TCACTCTGCC TGGACTCTTA CAGACTATGC CAAGGAACAC CTTGCCCAGC
  TGCAGGAGAA GGCTGAGCAG ATCGCTGGCC GCATGCTCCG CTTCTCTGTG TTCTACCGCA
  ACCATCACAA GGAGTACTTC CAGCATGCCA GGTAGGGCAA GTCAGAACTG CTAGATCCTT
  CCAGATCCTC CTCCACCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39224245	mCV24332342	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss139684658	ENSMUSSNP1768789	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30814717					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70702856 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6694	CpG island 6694	1450 bp proximal
Phyhip	phytanoyl-CoA hydroxylase interacting protein	within coordinates
Rr290302	regulatory region 290302	1745 bp proximal
Tssr4470	transcription start site region 4470	1194 bp upstream
Tssr126423	transcription start site region 126423	1039 bp upstream
Tssr126424	transcription start site region 126424	1123 bp upstream
Tssr126425	transcription start site region 126425	1150 bp upstream
Tssr126426	transcription start site region 126426	1307 bp upstream
Tssr126427	transcription start site region 126427	1404 bp upstream
Tssr126428	transcription start site region 126428	1437 bp upstream