rs30814748 SNP Detail

Summary

• ID
  rs30814748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136536583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA TACACCACAC
  ACTGAGAGCT CAGGGTAGGG GTTGGCCACT ATTGTTTTTA TCTTAGGGTG GCACTGGAAG
  GGAGGGTTTG GCGCAATGCG TCAGGGGTGA ACACACACAT ACACACACAC ACACACACAC
  ACACACACAC ACACACACAC ACACACACAC GCAGGAGAGC TCAGGGCAGC CTGTTTTGTT
  Y
  GATCAGTGTG ACTCTCTGAG AAATCCTGGC ATCTGAAAGG CCTATCTGGC CACGTTTCCC
  CTACTAAGGA GTTCCCTTTG GGGCCTTCGT TCAAGCTGCC AGGATCGAAT TGGCTCACAT
  CTAGGCTGAA TGGTTTAACT TTTGAGGATT TGGGCCATTT TCCTAAAACT CTCTGGGACT
  CAGTTTCTTA CCGGGAGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46986589	NES10886021	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30814748					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46986589	NES10886021	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136536583 () rs orientation: forward

Symbol	Name	Function Class
Gm66095	predicted gene, 66095	757 bp downstream
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	Intron
Rr585881	regulatory region 585881	within coordinates