rs30818231 SNP Detail

Summary

• ID
  rs30818231
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74317558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTTCCCAGA CCTGGCCTTC GGGAGCCTCT CACCCAGTGG CTGGCCAGTT ACTGTCCTCT
  CTTGGCACCC TGATGTGGGT AGGCAAAGAT TGACAGATGC TTTGGGTAGG TTGCCTTCCA
  GTCTAGACAG GCATAAACAT AGCTGCCCAG GGGCTGCAGG ATGGCTGAGA GGCGAAGCTG
  CCTGTGGGAA CTGTGGTTAT CGCCTGAAGT GTAGCCTCTT CTAAGATAAC ACCAGAATTG
  ATTTTCCAAG AAAACCCAAA AGCAAGACTT CCCTATGCAG TTGGTTTTTT TTAGTTGGTT
  K
  TTTTTTTTTT TTTTTTTAAG TTGGCAACTG AAAAAAATCT GTATCAGAAA AAAAAGGTAT
  GGCTCAGAGT CTGAGTCCAA AGCCTCAGTG ATAATGTGCT GTCCCCACCT GGGCAGTGAC
  TGCAGGACCA ACCTAACTCT GGCCACTCCT CCATCCAGGC ATGCTTTCTG CAGCTCCGGA
  CCCTCCATGT GCCAAGACCC ATGATGACAC CCAACAGCAC TGAGCTGTCG GCCATTCCCA
  TGGGGGTTCT GGGGCTTTCC TTGGCCCTGG CAAGCCTCAT CGTCATCGCC AACCTGCTCC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44967429	mCV23129164	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30818231					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74317558 () rs orientation: forward

Symbol	Name	Function Class
Aamp	angio-associated migratory protein	1441 bp downstream
Gpbar1	G protein-coupled bile acid receptor 1	151 bp upstream
Rr17376	regulatory region 17376	843 bp proximal
Tssr7370	transcription start site region 7370	1279 bp downstream