rs30819899 SNP Detail

Summary

• ID
  rs30819899
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91179835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATT AAGAGAGCCG GTGGGCAGCC
  M
  TGGCAGGTCT GAGCAGCACA GTGCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44967748	mCV25408070	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss144943465	ENSMUSSNP6094161	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30819899					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91179835 () rs orientation: forward

Symbol	Name	Function Class
Cpgi571	CpG island 571	1022 bp distal
Rr366958	regulatory region 366958	1867 bp downstream
Tssr8065	transcription start site region 8065	1897 bp downstream
Tssr8066	transcription start site region 8066	1803 bp downstream
Tssr8067	transcription start site region 8067	1733 bp downstream
Tssr8068	transcription start site region 8068	1605 bp downstream
Tssr8069	transcription start site region 8069	1527 bp downstream
Tssr12939	transcription start site region 12939	704 bp upstream
Ube2f	ubiquitin-conjugating enzyme E2F (putative)	within coordinates