rs30821048 SNP Detail

Summary

• ID
  rs30821048
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61067086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGACAATGA AATCTAAAAC
  TATCCTTTTT CTGATGCCTT CATGATTAGG AGAAATCATC TTCTGACCAA GAACTAGAAT
  TCTATAGTTT TGTTATTAAG CATAAGTTGA TTTTTTTCCT TTATTCTCTC TCTCTCTCTC
  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCCTTT ACCTACAAAA
  Y
  GGAGACATTA TTAACTCCAA CACCAGCTAA CATTTGACAT TTCAGTTGCA TATGAAAAAG
  AATGTTCGAA AGGTATAAAA CAATACAATG ATATCCTAAT TCCACTGGTC TTATTTTAAT
  ATTAAAAGTC TCTTGCAAAA CAAAATGCCT ACATTTATAG CTTCTAATAA AATTTACAAA
  GTACAACCGT TTTCCATCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46987658	NES10785547	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs30821048					SNP	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46987658	NES10785547	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61067086 () rs orientation: forward

Symbol	Name	Function Class
Rr577474	regulatory region 577474	206 bp proximal
Rr577475	regulatory region 577475	498 bp proximal