rs30821695 SNP Detail

Summary

• ID
  rs30821695
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5650231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACA AAAAACAAAA CAAATTTTAA
  R
  GTCTGTACAT GGTTGGTGGC AGAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss44967964	mCV25320805	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146012725	ENSMUSSNP3041539	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss325717120	CHEV_19_5600203	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30821695					SNP	G	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5650231 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10461	CpG island 10461	1490 bp proximal
Rnaseh2c	ribonuclease H2, subunit C	1670 bp upstream
Rr363585	regulatory region 363585	1369 bp proximal
Rr370434	regulatory region 370434	1573 bp upstream
Tssr154457	transcription start site region 154457	1638 bp upstream
Tssr154458	transcription start site region 154458	1651 bp upstream