rs30822327 SNP Detail

Summary

• ID
  rs30822327
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156819585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGG TTTAGAAGAG TGGGTGAGGG
  R
  AAAGAGGGGC GGGGGCAGGG AGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss44967776	mCV24596241	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30822327					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156819585 () rs orientation: forward

Symbol	Name	Function Class
Gm28694	predicted gene 28694	within coordinates
Gm70243	predicted gene, 70243	1756 bp upstream
Rr372293	regulatory region 372293	1701 bp upstream
Rr396431	regulatory region 396431	1432 bp downstream
Rr421298	regulatory region 421298	490 bp distal
Rr421299	regulatory region 421299	334 bp distal
Rr421300	regulatory region 421300	529 bp proximal
Rr421301	regulatory region 421301	1927 bp proximal