rs30829628 SNP Detail

Summary

• ID
  rs30829628
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140590838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCAGGCAT GATCTCTTGT
  GTGACTTCAG GTATGGTTGG CTCTCTCTGA GCCTTGGGGC AGAGCCATGA GCCTATCTGT
  ACCCAGAGAA GGAAAAAAGG GGAAGAAATT GAGCATAGCA GCACACACCC ACCCCGCAAT
  CCCAGCCCTT GGGAGGCAGA AGCAGGAGAA TCACAAGTTC TAGACTGGCC AAGGCTACAC
  K
  GTGAAACCCC GCCGAATGGG TTTCATTCAC AAGTGAATGA AATTTTAAAA ATTGAAAAGA
  GAAGACAGGG AGAGAGCTGG GCCAAAGGTG ACCCTGTGCC AGGGCCACAC TTGGGTCATC
  CCCCAGTTGC AGCATCTCCC AGAGTAAGAG CTGTAGGAAT GGAGGCCTGA GGATGTAGCT
  CAGCTGGCAG AGTGCTTGCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46450136	mCV22971619	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss147716744	ENSMUSSNP2672169	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30829628					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140590838 () rs orientation: forward

Symbol	Name	Function Class
Gm69366	predicted gene, 69366	within coordinates
Rr377299	regulatory region 377299	within coordinates