rs30829762 SNP Detail

Summary

• ID
  rs30829762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52250019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAG CAGAGACGCA TTAGAAGGTA
  Y
  AAATGGATTT CTCCTCAGGG GAAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39224999	mCV24785367	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss139499028	ENSMUSSNP1980098	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss324626580	CHEV_14_52632237	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30829762					SNP	T	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52250019 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6436	CpG island 6436	1282 bp proximal
Tssr128473	transcription start site region 128473	1699 bp upstream
Tssr128474	transcription start site region 128474	1657 bp upstream
Tssr128475	transcription start site region 128475	1997 bp downstream
Zfp219	zinc finger protein 219	within coordinates