rs30832386 SNP Detail

Summary

• ID
  rs30832386
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136854285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTATTTTT TGGGTGGGGG
  GATATGGAGA GACTGGGAAA TGAGTGTGAT CAGGGTGAAA TTCCCAAAGA ATCAATAAAA
  ATATTATGTT GAAAAAAATT CCAACTCAAA GTTCTAATAA GAGTCAGTTC TAAGTTTTCT
  AGTCTGAAAG TCCCCATTTG TAAGACTGCA AATAGTCACA GTGTCTTTAG GACATAAACT
  Y
  AAGATGGTAA AAGTGGTGAG TGCTAGATTC CAGACTGGAA CACAGAATAT CTACTGAAGG
  CAGATAGACT TCAGAGTACA CTCATAACTA GACATTGATT CTAACTCAGG AGATCATGAA
  CAGTTAAAGA TGGGCTTTCA GTTAACATTA CCTGATCCAT TAACAGCATT CAGAGATCAT
  CATCTCAGAT ACATACCATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46988917	NES10875456	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30832386					SNP	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46988917	NES10875456	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136854285 () rs orientation: forward

Symbol	Name	Function Class
Rr585922	regulatory region 585922	1810 bp proximal